Did you put any medication in the hole?
It looks like something is oozing out of it in
the third photo.

I would flush out the hole with some Nolvasan also
known as chlorhexidine, maybe keep her inside for
observation for a few days.

If it is oozing something you might consider taking
her to a reptile vet, but if you can't, keeping her
clean and cleaning the hole with nolvasan should do
the tricks.

Those holes are fairly common in turtles found in the
wild, so I wouldn't worry too much. Just clean it out
and keep an eye on it.

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