"Did you test any actual muscle tissue for carotenoids."
no, we didn't test per se, but i looked at plenty of muscle during surgeries (gonadectomies) and didn't see any reddish tints. their muscles are basically clear (anaerobic white fibers), so it would be fairly noticeable.
"I am wondering if the flesh like in salmon darkens thus showing through the translucent portion of the skin. I have noticed in my unicolor Cribos the scales do not change color but the ventral scales turn yellow as does the skin between the scales. In the Trans Pecos Ratsnakes they get no sun but some will blush orange when fed carotene."
in the one varanid we had been feeding newly hatched (yolk-rich) chicks, the skin was very yellow. not the scales, but as you noticed, the skin between the scales. during surgery, the skin contained the yellow pigment, very obvious from the underside, and again, the muscle was clearish -- no yellow.
"Did you compair carotene against the carotenoides synthetic or natural?"
we tried organic skin extractions for carotenoids. if i recall correctly, hexane, chloroform, and a couple of others that were outlined in a reference manual on animal pigmentations. we ran one skin sample on HPLC to look for obvious peeks, but nothing jumped out. the fact that pterydines we identified were specific for the particular color of the beast (yellow vs. orange), suggested to us that we were looking at metabolic pigments and not dietary pigments.
another generality (and i'm sure there are exceptions as with everything in biology) is that dietary pigments tend to be diffusely deposited in tissues of the same type (salmon muscle, human skin after lots of carrots, the yellows you're seeing in snake skin, the yellow in our monitor). whereas colors that are laid down in specific regions/patterns may be more specific to pigments laid down by specific pigment-cell (chromatophore) distributions. of course, a diffuse increase in a dietary pigment can intensify a pigment specifically held within a chromatophore.
cool stuff,
matt