Check out Greg Graziani's history on the below link. The oldest morph is albino at 11 years so only 5 or 6 generations tops (most probably much less). There have also been quite a few new imported albinos in this time as well as lots of outbreeding. I'm not aware of any problems associated with the albino ball python lines yet but reports of one eyed albino burms and boa constrictors are heard from time to time so I suppose it's possible.
I think the two things that ball pythons have going for them so far is that there is a huge imported gene pool with more every year and we haven't been breeding them very long. Bob Clark pretty much started it off with the albinos in 1992 and it's been growing every year since then. Because of the imports I don't think many bothered before that. It's still hard to sell normal ball pythons at a profit due to the continuing imports so the current captive bred "normal" population is mainly a byproduct of interest in the morphs and in most cases actual morph breeding programs.
Documentation of lineages (so as to be able to track problems and avoid inbreeding) would be a good idea but isn't often done in ball pythons. Apparently the chondropython people are the ones to talk to about that.
I know Dr. Mark Seward (http://www.drseward.com/) was looking into trying to identify the gene and develop a probe to test for het piebalds some years ago. The idea being that there would be a market for being able to pick the hets out of possible hets. The problem is that you would not have long to recover your investment before the morph price fell to where the test might no longer be economical. Perhaps the technology is now here such that tests could be developed quickly and cheaply enough. I'm thinking there might even be a market for basic paternity testing to certify that high dollar hets are from the claimed father and not a result of sperm retention, parthenogenesis, or a breeding mix up. Also, as multi possible het combinations become more common it would be nice to be able to test for several genes rather than just trusting to luck with small ball python clutches.
Greg Graziani's history