Brown can mean "I'm too hot", "I'm sick", "My diet is wrong", "I'm cold", "I'm going to shed" or just "I'm stressed from no room to roam/being looked at all the time. Give me a bigger enclosure and someplace to hide!"
> I am using a 100 watt esu reptile bright light, and a fifteen watt flourescent uvb iguana light. She is housed in a 25 gallon high tank, with repti bark as a substrate.
Others have given good advice about the lights and substrate; something else that will lower the temps is getting her a bigger enclosure. Honestly sounds like she needs it... I have an ig that's about half a year old, and he just outgrew a 40-gallon I temporarily kept him in.
>She has plenty of branches and vines to climb on.
Sounds like a fun iggy playground, with the vines and stuff! If you want to eliminate any factor that could negatively affect health, I would definately go to http://www.anapsid.org and read about cage accessories being possible harbors for bugs and about diet and everything else.
>Is she cooking in the heat? or is color rubbing off of the bark? or does it have something to do with the diet (she is fed a mixture of dark greens, along with bananas and broccoli, with an occasional variety of fruit -- reptivite every other feeding.)
Personally, I think that while the overheating is contributing to her brown color, the diet probably is, too. Broccoli isn't great for iguanas, and fruit doesn't do a whole lot nutritionally, especially if you're feeding sugary banana as a staple every day. Try some orange/yellow squash, parsnips, green beans or snow peas, and alfalfa pellets with a little tropical fruit like mango or papaya. Chop it up really small in the food processor, and keep giving a rotating variety of the greens.
Also, a few questions: Does she get baths? Have water to drink in the tank? How often does she eat and poop? Does she have a hiding place in the tank?