I don't know of anything from your frog that would look like this. I wouldn't worry about it if there are just the two dots. You could try scraping them off. Do you know anyone who works in a lab that has a microbiology department, or who can look at it under a microscope for you? Or perhaps the biology department at a nearby university? It doesn't take an expert to see if it's a fungus or a kind of bacteria, perhaps some kind of scale insect or just amorphous debris. They just need to crush it on a slide, add a little normal saline and a cover slip. A fungus will have filaments and/or spores. Bacteria will have typical bacterial forms--rods, cocci, or more rarely be filamentous. It would take some work and expertise to identify the specie further than this, and probably not worth the time and expense.
Before I retired, people were always bringing me stuff like this and I'd look at it on my own time, just for fun. Some labs frown on this, but I always gave the personnel freedom to play around with odd stuff off the record, provided it didn't involve a clinical diagnosis on a human. It wouldn't hurt to ask. Your safest bet might be the university biology department.
If it were a plant disease, I should think it would be all over the place and not just two isolated dots.
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Patty
Pahsimeroi, Idaho
4 D. auratus blue
5 D. galactonotus pumpkin orange splash back
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6 D. leucomelas
4 D. pumilio Bastimentos
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4 P. terribilis
4 D. reticulatus
4 D. castaneoticus