flagyl, and Panicur are very forgiving. If your even close with the dose, it should be of no harm. You are correct, those are often used in a shot gun approach usually with good results.
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Disclaimer: I do keep several snakes in pairs, and some in groups. However I realize that things can go wrong, and I have to keep a close eye on those groups, to be sure they are not being adversely affected by these living conditions. Also if one happens to eat it's cagemate, it is 100% my fault, and I know the risks in advance!

What's wrong with using CAUTION?!?!?!
King Snakes! Who can make a better mouse trap?
~ Jorge Sierra www.SierraSnakes.com

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